PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK31014.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family Trihelix
Protein Properties Length: 309aa    MW: 34277.6 Da    PI: 5.9439
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK31014.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix91.21.1e-2842132185
    trihelix   1 rWtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                 rWt+qe+l+Li+++r  e+r+rrg+      + +p+W++vs+++r++g++r+p+qC+++w+nl+++ykkike+e++ ++e++s + + +++
  KFK31014.1  42 RWTRQEILVLIQGKRVAENRVRRGRaalgsgQLEPKWASVSSYCRRHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIKEETESYWLMRNDV 132
                 8**********************8666777799********************************************99999999888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.3E-1342128No hitNo description
PROSITE profilePS500906.53942105IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.604.9E-542104IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050777Biological Processnegative regulation of immune response
GO:0071219Biological Processcellular response to molecule of bacterial origin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MALEQLGLGV SGVDGDVNGV NKSGGESNEG GDDGVKTARL PRWTRQEILV LIQGKRVAEN  60
RVRRGRAALG SGQLEPKWAS VSSYCRRHGV NRGPVQCRKR WSNLAGDYKK IKEWESQIKE  120
ETESYWLMRN DVRREKKLPG FFDKEVYDIV DGGVIPPPPE PVLALGLAPA EGLLSGFDPR  180
EEERSQAPVA ISVPDIDKEK ETDCGADQGR VKEKHPEAAN PEAASTSQEE RKRKRKAVGE  240
DEEGKEETKS MQNQLIEILE RNGQLLAAQL EVQNINLKLD REQRKDHGDS LVAVLNKLAD  300
AVAKIADKM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1230235RKRKRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00288DAPTransfer from AT2G33550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY0653640.0AY065364.1 Arabidopsis thaliana unknown protein (At2g33550) mRNA, complete cds.
GenBankAY0963890.0AY096389.1 Arabidopsis thaliana unknown protein (At2g33550) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002881288.11e-173hypothetical protein ARALYDRAFT_902429
SwissprotQ8VZ201e-171ASR3_ARATH; Trihelix transcription factor ASR3
TrEMBLA0A087GMB20.0A0A087GMB2_ARAAL; Uncharacterized protein
STRINGscaffold_401930.11e-173(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM65572843
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-136Trihelix family protein